The University of Medical Sciences and Technology established the Faculty of Engineering in 2002 to manage graduate education and research. The Faculty of Engineering manages teaching and research programs in the Faculty's departments of Biomedical Engineering and Electronics Engineering. Specialization-Option courses are designed to introduce the students to specialization in specific areas. Students select either from among departmental courses based on their personal interests or choose one or two option sequences from among those specified by their department. The Faculty of Engineering strives to be:

1. A leader in its field, recognized locally and internationally for excellence and focus on quality, renowned for its competitiveness and relevance through continuous innovation.

2. A home for scholars, employers and those requiring research solutions.

3. Sending lecturers and teaching assistants to educational courses to improve their performance and skills.

4. Build the culture of integrity by offering connection between the Biomedical Engineering and Electronics Engineering. And the other medical and electronics specializations.

5. Supporting research and providing funds.

6. Training courses in BME and EE for technicians and specialists.

7. Organizing lectures, workshops and seminars about new technologies in the field

The course of 5 academic years leads to a B.Sc. (Honors) in Biomedical Engineering (specialization in Bio-instrumentation, Medical Imaging and Medical Informatics) and Electronics Engineering (specialization in Communication and Control). The course is based on the international updated curricula on biomedical engineering and electronics engineering and is according to the guidelines laid by the Ministry of Higher Education and Sudan Engineering Council. The curriculum includes courses in life sciences, electronics, communication, electrical engineering computer sciences and information systems. The practical of medical science portion is conducted in the Faculty of Medicine laboratories and supervised by the faculty staff. The faculty has established advanced Electronics and Biomedical laboratories and workshop such as Electrical, Electronics, Communication, Digital and Bio-instrumentation, Biosensors, Microprocessor, Microcontroller & interfacing, CAD laboratories. All courses are conducted in English Language.